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The ballast resistors simply prevent higher voltage from one place to another, reducing it to the electronic ignition which runs on 9.7v instead of 12v, so that one is OK. On the other side, wires going into a wiring harness doesn't give any indication of where they terminate or go to, so the wiring needs to be tracked down. I don't think it it can really do any harm reducing the voltage, but you could get a wiring diagram and rewire the coil properly, the Accel super coils are pretty good units.